Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trdmt1O55055 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trdmt1O55055 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.74■□□□□ 0.75
Trdmt1O55055 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trdmt1O55055 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.74■□□□□ 0.75
Trdmt1O55055 Gm18101-201ENSMUST00000215769 548 ntBASIC19.74■□□□□ 0.75
Trdmt1O55055 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Trdmt1O55055 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trdmt1O55055 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.74■□□□□ 0.75
Trdmt1O55055 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.74■□□□□ 0.75
Trdmt1O55055 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trdmt1O55055 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trdmt1O55055 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdmt1O55055 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trdmt1O55055 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.73■□□□□ 0.75
Trdmt1O55055 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trdmt1O55055 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trdmt1O55055 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trdmt1O55055 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trdmt1O55055 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.73■□□□□ 0.75
Trdmt1O55055 Gm22697-201ENSMUST00000175194 63 ntBASIC19.73■□□□□ 0.75
Trdmt1O55055 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.73■□□□□ 0.75
Trdmt1O55055 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trdmt1O55055 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Trdmt1O55055 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trdmt1O55055 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trdmt1O55055 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.72■□□□□ 0.75
Trdmt1O55055 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trdmt1O55055 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trdmt1O55055 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trdmt1O55055 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.72■□□□□ 0.75
Trdmt1O55055 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.72■□□□□ 0.75
Trdmt1O55055 Gm33142-201ENSMUST00000193913 867 ntBASIC19.72■□□□□ 0.75
Trdmt1O55055 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trdmt1O55055 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trdmt1O55055 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trdmt1O55055 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trdmt1O55055 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trdmt1O55055 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trdmt1O55055 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trdmt1O55055 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.71■□□□□ 0.75
Trdmt1O55055 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trdmt1O55055 Gm10418-201ENSMUST00000100943 576 ntBASIC19.71■□□□□ 0.75
Trdmt1O55055 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trdmt1O55055 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trdmt1O55055 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trdmt1O55055 Gm13401-201ENSMUST00000117074 291 ntBASIC19.71■□□□□ 0.75
Trdmt1O55055 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.71■□□□□ 0.75
Trdmt1O55055 Gm7638-201ENSMUST00000121348 967 ntBASIC19.71■□□□□ 0.75
Trdmt1O55055 Gm24841-201ENSMUST00000158676 357 ntBASIC19.71■□□□□ 0.75
Trdmt1O55055 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.71■□□□□ 0.75
Trdmt1O55055 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trdmt1O55055 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trdmt1O55055 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trdmt1O55055 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trdmt1O55055 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trdmt1O55055 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trdmt1O55055 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trdmt1O55055 Tgds-204ENSMUST00000228543 1594 ntBASIC19.7■□□□□ 0.74
Trdmt1O55055 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trdmt1O55055 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trdmt1O55055 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trdmt1O55055 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trdmt1O55055 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trdmt1O55055 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trdmt1O55055 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trdmt1O55055 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trdmt1O55055 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trdmt1O55055 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trdmt1O55055 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trdmt1O55055 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trdmt1O55055 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trdmt1O55055 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trdmt1O55055 Gm16061-201ENSMUST00000122167 857 ntBASIC19.69■□□□□ 0.74
Trdmt1O55055 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trdmt1O55055 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trdmt1O55055 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
Trdmt1O55055 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trdmt1O55055 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Trdmt1O55055 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trdmt1O55055 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.69■□□□□ 0.74
Trdmt1O55055 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trdmt1O55055 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trdmt1O55055 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trdmt1O55055 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trdmt1O55055 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trdmt1O55055 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms