Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SncaO55042 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SncaO55042 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.83□□□□□ -0.03
SncaO55042 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SncaO55042 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.83□□□□□ -0.03
SncaO55042 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SncaO55042 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.83□□□□□ -0.03
SncaO55042 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SncaO55042 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
SncaO55042 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
SncaO55042 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SncaO55042 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
SncaO55042 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SncaO55042 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.83□□□□□ -0.04
SncaO55042 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SncaO55042 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.83□□□□□ -0.04
SncaO55042 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SncaO55042 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SncaO55042 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SncaO55042 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SncaO55042 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SncaO55042 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SncaO55042 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SncaO55042 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SncaO55042 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SncaO55042 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SncaO55042 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.83□□□□□ -0.04
SncaO55042 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.83□□□□□ -0.04
SncaO55042 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SncaO55042 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SncaO55042 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SncaO55042 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SncaO55042 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
SncaO55042 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.82□□□□□ -0.04
SncaO55042 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.82□□□□□ -0.04
SncaO55042 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SncaO55042 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SncaO55042 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Fst-202ENSMUST00000223640 2612 ntBASIC14.81□□□□□ -0.04
SncaO55042 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Gm13146-201ENSMUST00000118508 780 ntBASIC14.81□□□□□ -0.04
SncaO55042 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.81□□□□□ -0.04
SncaO55042 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SncaO55042 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SncaO55042 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.8□□□□□ -0.04
SncaO55042 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.8□□□□□ -0.04
SncaO55042 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SncaO55042 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SncaO55042 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SncaO55042 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
SncaO55042 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SncaO55042 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SncaO55042 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SncaO55042 Gm13234-201ENSMUST00000120010 747 ntBASIC14.79□□□□□ -0.04
SncaO55042 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.79□□□□□ -0.04
SncaO55042 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SncaO55042 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.79□□□□□ -0.04
SncaO55042 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SncaO55042 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SncaO55042 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SncaO55042 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.79□□□□□ -0.04
SncaO55042 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.79□□□□□ -0.04
SncaO55042 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
SncaO55042 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SncaO55042 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms