Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Limk2O54785 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Limk2O54785 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk2O54785 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk2O54785 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk2O54785 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Limk2O54785 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.15■□□□□ 0.5
Limk2O54785 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Limk2O54785 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Limk2O54785 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Limk2O54785 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Limk2O54785 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk2O54785 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Limk2O54785 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.14■□□□□ 0.49
Limk2O54785 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.14■□□□□ 0.49
Limk2O54785 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Limk2O54785 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.14■□□□□ 0.49
Limk2O54785 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Limk2O54785 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk2O54785 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk2O54785 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk2O54785 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk2O54785 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk2O54785 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk2O54785 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Limk2O54785 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Limk2O54785 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Limk2O54785 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Limk2O54785 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Limk2O54785 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.13■□□□□ 0.49
Limk2O54785 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Limk2O54785 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Limk2O54785 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Limk2O54785 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Limk2O54785 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Limk2O54785 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.13■□□□□ 0.49
Limk2O54785 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Limk2O54785 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.13■□□□□ 0.49
Limk2O54785 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Limk2O54785 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Limk2O54785 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.12■□□□□ 0.49
Limk2O54785 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.12■□□□□ 0.49
Limk2O54785 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Limk2O54785 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Limk2O54785 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk2O54785 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Limk2O54785 Gm15378-201ENSMUST00000121894 207 ntBASIC18.11■□□□□ 0.49
Limk2O54785 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Limk2O54785 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.11■□□□□ 0.49
Limk2O54785 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Limk2O54785 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk2O54785 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk2O54785 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk2O54785 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk2O54785 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Limk2O54785 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.11■□□□□ 0.49
Limk2O54785 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Limk2O54785 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Limk2O54785 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk2O54785 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk2O54785 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.1■□□□□ 0.49
Limk2O54785 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Limk2O54785 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Limk2O54785 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk2O54785 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Limk2O54785 Gm10698-201ENSMUST00000182663 604 ntBASIC18.1■□□□□ 0.49
Limk2O54785 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk2O54785 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Limk2O54785 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Limk2O54785 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.1■□□□□ 0.49
Limk2O54785 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.09■□□□□ 0.49
Limk2O54785 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.09■□□□□ 0.49
Limk2O54785 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.09■□□□□ 0.49
Limk2O54785 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk2O54785 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Limk2O54785 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk2O54785 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.09■□□□□ 0.49
Limk2O54785 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk2O54785 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.09■□□□□ 0.49
Limk2O54785 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Limk2O54785 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk2O54785 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk2O54785 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk2O54785 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk2O54785 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Limk2O54785 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Limk2O54785 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Limk2O54785 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Limk2O54785 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms