Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1i3O35627 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1i3O35627 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1i3O35627 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1i3O35627 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1i3O35627 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1i3O35627 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Nr1i3O35627 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1i3O35627 Gm2399-201ENSMUST00000104944 225 ntBASIC19.21■□□□□ 0.67
Nr1i3O35627 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.21■□□□□ 0.67
Nr1i3O35627 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.21■□□□□ 0.67
Nr1i3O35627 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1i3O35627 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1i3O35627 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.21■□□□□ 0.67
Nr1i3O35627 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Nr1i3O35627 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1i3O35627 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1i3O35627 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1i3O35627 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nr1i3O35627 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Nr1i3O35627 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1i3O35627 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1i3O35627 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1i3O35627 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.2■□□□□ 0.66
Nr1i3O35627 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1i3O35627 Gm26571-201ENSMUST00000181399 666 ntBASIC19.2■□□□□ 0.66
Nr1i3O35627 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1i3O35627 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.2■□□□□ 0.66
Nr1i3O35627 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1i3O35627 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1i3O35627 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1i3O35627 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nr1i3O35627 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Nr1i3O35627 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.19■□□□□ 0.66
Nr1i3O35627 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1i3O35627 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1i3O35627 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nr1i3O35627 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1i3O35627 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1i3O35627 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nr1i3O35627 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nr1i3O35627 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nr1i3O35627 Zfp783-201ENSMUST00000095946 670 ntBASIC19.19■□□□□ 0.66
Nr1i3O35627 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1i3O35627 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1i3O35627 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1i3O35627 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1i3O35627 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1i3O35627 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1i3O35627 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nr1i3O35627 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.19■□□□□ 0.66
Nr1i3O35627 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nr1i3O35627 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Gm44549-201ENSMUST00000208351 577 ntBASIC19.18■□□□□ 0.66
Nr1i3O35627 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.18■□□□□ 0.66
Nr1i3O35627 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nr1i3O35627 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nr1i3O35627 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.17■□□□□ 0.66
Nr1i3O35627 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.17■□□□□ 0.66
Nr1i3O35627 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.17■□□□□ 0.66
Nr1i3O35627 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.17■□□□□ 0.66
Nr1i3O35627 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.17■□□□□ 0.66
Nr1i3O35627 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.17■□□□□ 0.66
Nr1i3O35627 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nr1i3O35627 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.17■□□□□ 0.66
Nr1i3O35627 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.16■□□□□ 0.66
Nr1i3O35627 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.16■□□□□ 0.66
Nr1i3O35627 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nr1i3O35627 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms