Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca4O35600 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca4O35600 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.84■□□□□ 0.29
Abca4O35600 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Abca4O35600 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.84■□□□□ 0.29
Abca4O35600 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.84■□□□□ 0.29
Abca4O35600 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Abca4O35600 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.84■□□□□ 0.29
Abca4O35600 Gm37722-201ENSMUST00000193757 208 ntBASIC16.84■□□□□ 0.29
Abca4O35600 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca4O35600 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.84■□□□□ 0.29
Abca4O35600 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.84■□□□□ 0.29
Abca4O35600 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca4O35600 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca4O35600 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Abca4O35600 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca4O35600 Gm10418-201ENSMUST00000100943 576 ntBASIC16.84■□□□□ 0.29
Abca4O35600 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.84■□□□□ 0.29
Abca4O35600 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Abca4O35600 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.84■□□□□ 0.29
Abca4O35600 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Abca4O35600 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Abca4O35600 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Abca4O35600 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Abca4O35600 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Abca4O35600 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abca4O35600 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.83■□□□□ 0.28
Abca4O35600 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Abca4O35600 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abca4O35600 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Abca4O35600 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Abca4O35600 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.83■□□□□ 0.28
Abca4O35600 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abca4O35600 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abca4O35600 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Abca4O35600 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Abca4O35600 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
Abca4O35600 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abca4O35600 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Abca4O35600 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.83■□□□□ 0.28
Abca4O35600 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.83■□□□□ 0.28
Abca4O35600 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca4O35600 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Abca4O35600 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Abca4O35600 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Abca4O35600 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca4O35600 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca4O35600 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca4O35600 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca4O35600 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Abca4O35600 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca4O35600 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca4O35600 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.82■□□□□ 0.28
Abca4O35600 Gm15467-201ENSMUST00000120582 445 ntBASIC16.82■□□□□ 0.28
Abca4O35600 Gm12895-201ENSMUST00000122214 226 ntBASIC16.82■□□□□ 0.28
Abca4O35600 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.82■□□□□ 0.28
Abca4O35600 Gm4974-201ENSMUST00000209974 875 ntBASIC16.82■□□□□ 0.28
Abca4O35600 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca4O35600 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca4O35600 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abca4O35600 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Abca4O35600 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.81■□□□□ 0.28
Abca4O35600 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Abca4O35600 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abca4O35600 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Abca4O35600 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Abca4O35600 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abca4O35600 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abca4O35600 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abca4O35600 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.81■□□□□ 0.28
Abca4O35600 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Abca4O35600 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.81■□□□□ 0.28
Abca4O35600 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abca4O35600 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abca4O35600 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abca4O35600 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Abca4O35600 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Abca4O35600 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Abca4O35600 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Abca4O35600 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Abca4O35600 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca4O35600 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca4O35600 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Abca4O35600 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.8■□□□□ 0.28
Abca4O35600 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Abca4O35600 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca4O35600 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca4O35600 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca4O35600 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Abca4O35600 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Abca4O35600 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.8■□□□□ 0.28
Abca4O35600 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.8■□□□□ 0.28
Abca4O35600 Gm11779-201ENSMUST00000118541 368 ntBASIC16.8■□□□□ 0.28
Abca4O35600 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.8■□□□□ 0.28
Abca4O35600 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.8■□□□□ 0.28
Abca4O35600 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.8■□□□□ 0.28
Abca4O35600 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abca4O35600 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.8■□□□□ 0.28
Abca4O35600 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.8■□□□□ 0.28
Abca4O35600 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms