Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk4O35493 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk4O35493 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.14■□□□□ 0.33
Clk4O35493 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Clk4O35493 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Clk4O35493 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clk4O35493 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.14■□□□□ 0.33
Clk4O35493 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.14■□□□□ 0.33
Clk4O35493 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk4O35493 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk4O35493 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk4O35493 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clk4O35493 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Clk4O35493 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk4O35493 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk4O35493 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.13■□□□□ 0.33
Clk4O35493 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clk4O35493 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clk4O35493 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk4O35493 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk4O35493 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clk4O35493 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clk4O35493 Gm2399-201ENSMUST00000104944 225 ntBASIC17.13■□□□□ 0.33
Clk4O35493 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Clk4O35493 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.13■□□□□ 0.33
Clk4O35493 Gm2559-201ENSMUST00000201323 363 ntBASIC17.13■□□□□ 0.33
Clk4O35493 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk4O35493 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk4O35493 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk4O35493 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clk4O35493 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk4O35493 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk4O35493 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clk4O35493 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clk4O35493 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk4O35493 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clk4O35493 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.12■□□□□ 0.33
Clk4O35493 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.12■□□□□ 0.33
Clk4O35493 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.12■□□□□ 0.33
Clk4O35493 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.12■□□□□ 0.33
Clk4O35493 Gm20049-201ENSMUST00000219950 730 ntBASIC17.12■□□□□ 0.33
Clk4O35493 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk4O35493 Flg-201ENSMUST00000050758 1488 ntBASIC17.12■□□□□ 0.33
Clk4O35493 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Clk4O35493 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Clk4O35493 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Clk4O35493 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clk4O35493 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk4O35493 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk4O35493 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk4O35493 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Clk4O35493 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk4O35493 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk4O35493 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.1■□□□□ 0.33
Clk4O35493 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk4O35493 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.1■□□□□ 0.33
Clk4O35493 Dio3-201ENSMUST00000097228 1449 ntBASIC17.1■□□□□ 0.33
Clk4O35493 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.1■□□□□ 0.33
Clk4O35493 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk4O35493 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Clk4O35493 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk4O35493 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clk4O35493 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk4O35493 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk4O35493 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk4O35493 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Clk4O35493 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clk4O35493 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.09■□□□□ 0.33
Clk4O35493 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.09■□□□□ 0.33
Clk4O35493 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.09■□□□□ 0.33
Clk4O35493 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms