Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk2O35491 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.47■□□□□ 0.71
Clk2O35491 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk2O35491 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk2O35491 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clk2O35491 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.47■□□□□ 0.71
Clk2O35491 Gm3375-201ENSMUST00000203929 796 ntBASIC19.47■□□□□ 0.71
Clk2O35491 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Clk2O35491 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.47■□□□□ 0.71
Clk2O35491 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clk2O35491 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk2O35491 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk2O35491 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk2O35491 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk2O35491 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clk2O35491 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.47■□□□□ 0.71
Clk2O35491 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Clk2O35491 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Clk2O35491 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clk2O35491 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Clk2O35491 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Clk2O35491 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Clk2O35491 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.46■□□□□ 0.71
Clk2O35491 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clk2O35491 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Clk2O35491 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clk2O35491 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clk2O35491 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clk2O35491 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.45■□□□□ 0.7
Clk2O35491 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Gm10517-202ENSMUST00000192970 758 ntBASIC19.45■□□□□ 0.7
Clk2O35491 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.45■□□□□ 0.7
Clk2O35491 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.45■□□□□ 0.7
Clk2O35491 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.45■□□□□ 0.7
Clk2O35491 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clk2O35491 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Clk2O35491 Gm10418-201ENSMUST00000100943 576 ntBASIC19.44■□□□□ 0.7
Clk2O35491 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.44■□□□□ 0.7
Clk2O35491 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk2O35491 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk2O35491 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk2O35491 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk2O35491 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk2O35491 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Clk2O35491 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Clk2O35491 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clk2O35491 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk2O35491 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk2O35491 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clk2O35491 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk2O35491 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clk2O35491 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clk2O35491 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.43■□□□□ 0.7
Clk2O35491 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk2O35491 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk2O35491 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clk2O35491 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clk2O35491 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clk2O35491 Fst-202ENSMUST00000223640 2612 ntBASIC19.42■□□□□ 0.7
Clk2O35491 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clk2O35491 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clk2O35491 Gm13401-201ENSMUST00000117074 291 ntBASIC19.42■□□□□ 0.7
Clk2O35491 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Clk2O35491 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.42■□□□□ 0.7
Clk2O35491 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Clk2O35491 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.42■□□□□ 0.7
Clk2O35491 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.42■□□□□ 0.7
Clk2O35491 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.42■□□□□ 0.7
Clk2O35491 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clk2O35491 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clk2O35491 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clk2O35491 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clk2O35491 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clk2O35491 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clk2O35491 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.41■□□□□ 0.7
Clk2O35491 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clk2O35491 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clk2O35491 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clk2O35491 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clk2O35491 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clk2O35491 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clk2O35491 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clk2O35491 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clk2O35491 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clk2O35491 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clk2O35491 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clk2O35491 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.4■□□□□ 0.7
Clk2O35491 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clk2O35491 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms