Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Clcn6O35454 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.94■□□□□ 0.62
Clcn6O35454 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.94■□□□□ 0.62
Clcn6O35454 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Clcn6O35454 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcn6O35454 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Clcn6O35454 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.93■□□□□ 0.62
Clcn6O35454 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC18.93■□□□□ 0.62
Clcn6O35454 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Gm10493-201ENSMUST00000097270 612 ntBASIC18.93■□□□□ 0.62
Clcn6O35454 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcn6O35454 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Clcn6O35454 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.92■□□□□ 0.62
Clcn6O35454 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.92■□□□□ 0.62
Clcn6O35454 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Clcn6O35454 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.92■□□□□ 0.62
Clcn6O35454 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Gm18351-201ENSMUST00000188646 883 ntBASIC18.92■□□□□ 0.62
Clcn6O35454 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcn6O35454 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn6O35454 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Clcn6O35454 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC18.91■□□□□ 0.62
Clcn6O35454 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC18.91■□□□□ 0.62
Clcn6O35454 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Clcn6O35454 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Clcn6O35454 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn6O35454 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcn6O35454 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.9■□□□□ 0.62
Clcn6O35454 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.9■□□□□ 0.62
Clcn6O35454 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Gm38205-201ENSMUST00000192243 258 ntBASIC18.9■□□□□ 0.62
Clcn6O35454 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.9■□□□□ 0.62
Clcn6O35454 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC18.9■□□□□ 0.62
Clcn6O35454 CT025526.1-201ENSMUST00000217327 267 ntBASIC18.9■□□□□ 0.62
Clcn6O35454 AC154252.1-201ENSMUST00000226041 473 ntBASIC18.9■□□□□ 0.62
Clcn6O35454 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcn6O35454 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Clcn6O35454 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clcn6O35454 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn6O35454 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.89■□□□□ 0.61
Clcn6O35454 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.89■□□□□ 0.61
Clcn6O35454 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Clcn6O35454 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn6O35454 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms