Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Tnfsf11O35235 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.96□□□□□ -0.17
Tnfsf11O35235 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.96□□□□□ -0.17
Tnfsf11O35235 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf11O35235 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tnfsf11O35235 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tnfsf11O35235 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.96□□□□□ -0.18
Tnfsf11O35235 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.95□□□□□ -0.18
Tnfsf11O35235 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.95□□□□□ -0.18
Tnfsf11O35235 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.95□□□□□ -0.18
Tnfsf11O35235 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tnfsf11O35235 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf11O35235 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf11O35235 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf11O35235 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.93□□□□□ -0.18
Tnfsf11O35235 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Gm11421-201ENSMUST00000122124 294 ntBASIC13.93□□□□□ -0.18
Tnfsf11O35235 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.93□□□□□ -0.18
Tnfsf11O35235 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.93□□□□□ -0.18
Tnfsf11O35235 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf11O35235 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf11O35235 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Tnfsf11O35235 Tgds-204ENSMUST00000228543 1594 ntBASIC13.92□□□□□ -0.18
Tnfsf11O35235 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf11O35235 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf11O35235 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms