Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.78■□□□□ 0.28
Cx3cl1O35188 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.78■□□□□ 0.28
Cx3cl1O35188 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.78■□□□□ 0.28
Cx3cl1O35188 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cx3cl1O35188 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cx3cl1O35188 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cx3cl1O35188 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cx3cl1O35188 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.77■□□□□ 0.28
Cx3cl1O35188 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cx3cl1O35188 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cx3cl1O35188 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cx3cl1O35188 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cx3cl1O35188 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Cx3cl1O35188 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cx3cl1O35188 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.77■□□□□ 0.27
Cx3cl1O35188 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cx3cl1O35188 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cx3cl1O35188 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.76■□□□□ 0.27
Cx3cl1O35188 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cl1O35188 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.76■□□□□ 0.27
Cx3cl1O35188 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cx3cl1O35188 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cx3cl1O35188 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Cx3cl1O35188 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cx3cl1O35188 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.73■□□□□ 0.27
Cx3cl1O35188 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cx3cl1O35188 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cx3cl1O35188 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms