Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Gm13158-201ENSMUST00000122007 736 ntBASIC19.15■□□□□ 0.66
Usp35M0QWN7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Gm10698-201ENSMUST00000182663 604 ntBASIC19.15■□□□□ 0.66
Usp35M0QWN7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.15■□□□□ 0.66
Usp35M0QWN7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp35M0QWN7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp35M0QWN7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Usp35M0QWN7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp35M0QWN7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp35M0QWN7 Gm15378-201ENSMUST00000121894 207 ntBASIC19.14■□□□□ 0.65
Usp35M0QWN7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp35M0QWN7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp35M0QWN7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp35M0QWN7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp35M0QWN7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp35M0QWN7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Usp35M0QWN7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp35M0QWN7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp35M0QWN7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp35M0QWN7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp35M0QWN7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp35M0QWN7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp35M0QWN7 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.13■□□□□ 0.65
Usp35M0QWN7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Usp35M0QWN7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp35M0QWN7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp35M0QWN7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Usp35M0QWN7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.12■□□□□ 0.65
Usp35M0QWN7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.12■□□□□ 0.65
Usp35M0QWN7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp35M0QWN7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp35M0QWN7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.11■□□□□ 0.65
Usp35M0QWN7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp35M0QWN7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.11■□□□□ 0.65
Usp35M0QWN7 Flg-201ENSMUST00000050758 1488 ntBASIC19.11■□□□□ 0.65
Usp35M0QWN7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp35M0QWN7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp35M0QWN7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp35M0QWN7 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.11■□□□□ 0.65
Usp35M0QWN7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp35M0QWN7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp35M0QWN7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp35M0QWN7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp35M0QWN7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Usp35M0QWN7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.1■□□□□ 0.65
Usp35M0QWN7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.1■□□□□ 0.65
Usp35M0QWN7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.1■□□□□ 0.65
Usp35M0QWN7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.1■□□□□ 0.65
Usp35M0QWN7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Usp35M0QWN7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp35M0QWN7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp35M0QWN7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp35M0QWN7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp35M0QWN7 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.09■□□□□ 0.65
Usp35M0QWN7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp35M0QWN7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp35M0QWN7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Usp35M0QWN7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp35M0QWN7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp35M0QWN7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Usp35M0QWN7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms