Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim55G3X8Y1 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.41■□□□□ 0.54
Trim55G3X8Y1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trim55G3X8Y1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim55G3X8Y1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim55G3X8Y1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim55G3X8Y1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim55G3X8Y1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trim55G3X8Y1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim55G3X8Y1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim55G3X8Y1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim55G3X8Y1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim55G3X8Y1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim55G3X8Y1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim55G3X8Y1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Gm10399-202ENSMUST00000202768 748 ntBASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim55G3X8Y1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim55G3X8Y1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms