Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh11xF6ZNL5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Gm11927-201ENSMUST00000118472 759 ntBASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Gm22240-201ENSMUST00000175225 82 ntBASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdh11xF6ZNL5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Mir2861-201ENSMUST00000175539 82 ntBASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdh11xF6ZNL5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh11xF6ZNL5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh11xF6ZNL5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh11xF6ZNL5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.72■□□□□ 0.75
Pcdh11xF6ZNL5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh11xF6ZNL5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh11xF6ZNL5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh11xF6ZNL5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdh11xF6ZNL5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh11xF6ZNL5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh11xF6ZNL5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh11xF6ZNL5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh11xF6ZNL5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh11xF6ZNL5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh11xF6ZNL5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh11xF6ZNL5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh11xF6ZNL5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh11xF6ZNL5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdh11xF6ZNL5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh11xF6ZNL5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh11xF6ZNL5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh11xF6ZNL5 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms