Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpsf4lE9Q2N0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Gm13158-201ENSMUST00000122007 736 ntBASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cpsf4lE9Q2N0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Mir2861-201ENSMUST00000175539 82 ntBASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Gm10138-203ENSMUST00000206952 366 ntBASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cpsf4lE9Q2N0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cpsf4lE9Q2N0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4lE9Q2N0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4lE9Q2N0 Rarb-207ENSMUST00000225921 2756 ntBASIC15.1■□□□□ 0.01
Cpsf4lE9Q2N0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cpsf4lE9Q2N0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cpsf4lE9Q2N0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cpsf4lE9Q2N0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Gm15375-201ENSMUST00000119510 849 ntBASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Idnk-204ENSMUST00000226010 1898 ntBASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cpsf4lE9Q2N0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cpsf4lE9Q2N0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Cpsf4lE9Q2N0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Cpsf4lE9Q2N0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cpsf4lE9Q2N0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms