Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col6a3E9PWQ3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col6a3E9PWQ3 Gm24513-201ENSMUST00000174964 138 ntBASIC18.03■□□□□ 0.48
Col6a3E9PWQ3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col6a3E9PWQ3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.03■□□□□ 0.48
Col6a3E9PWQ3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Col6a3E9PWQ3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.02■□□□□ 0.47
Col6a3E9PWQ3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col6a3E9PWQ3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col6a3E9PWQ3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col6a3E9PWQ3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Psmb5-202ENSMUST00000227257 622 ntBASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a3E9PWQ3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Col6a3E9PWQ3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col6a3E9PWQ3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col6a3E9PWQ3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col6a3E9PWQ3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col6a3E9PWQ3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18■□□□□ 0.47
Col6a3E9PWQ3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col6a3E9PWQ3 Gm37352-201ENSMUST00000193908 2181 ntBASIC18■□□□□ 0.47
Col6a3E9PWQ3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col6a3E9PWQ3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col6a3E9PWQ3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18■□□□□ 0.47
Col6a3E9PWQ3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col6a3E9PWQ3 Gm26308-201ENSMUST00000157768 69 ntBASIC18■□□□□ 0.47
Col6a3E9PWQ3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col6a3E9PWQ3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 Gm14494-201ENSMUST00000118786 435 ntBASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 Gm12895-201ENSMUST00000122214 226 ntBASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col6a3E9PWQ3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.98■□□□□ 0.47
Col6a3E9PWQ3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms