Protein–RNA interactions for Protein: E9PV98

Trim5, Tripartite motif-containing 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim5E9PV98 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.07■□□□□ 0.8
Trim5E9PV98 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim5E9PV98 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim5E9PV98 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim5E9PV98 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim5E9PV98 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.07■□□□□ 0.8
Trim5E9PV98 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim5E9PV98 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim5E9PV98 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim5E9PV98 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trim5E9PV98 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Trim5E9PV98 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim5E9PV98 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim5E9PV98 Gm16061-201ENSMUST00000122167 857 ntBASIC20.06■□□□□ 0.8
Trim5E9PV98 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim5E9PV98 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim5E9PV98 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim5E9PV98 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.05■□□□□ 0.8
Trim5E9PV98 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.05■□□□□ 0.8
Trim5E9PV98 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Trim5E9PV98 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim5E9PV98 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim5E9PV98 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim5E9PV98 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim5E9PV98 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim5E9PV98 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.05■□□□□ 0.8
Trim5E9PV98 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim5E9PV98 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim5E9PV98 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim5E9PV98 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim5E9PV98 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim5E9PV98 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim5E9PV98 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.05■□□□□ 0.8
Trim5E9PV98 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim5E9PV98 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim5E9PV98 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim5E9PV98 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim5E9PV98 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim5E9PV98 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim5E9PV98 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim5E9PV98 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim5E9PV98 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trim5E9PV98 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Trim5E9PV98 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim5E9PV98 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim5E9PV98 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim5E9PV98 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim5E9PV98 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim5E9PV98 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.04■□□□□ 0.8
Trim5E9PV98 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim5E9PV98 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim5E9PV98 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim5E9PV98 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim5E9PV98 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim5E9PV98 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim5E9PV98 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.03■□□□□ 0.8
Trim5E9PV98 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim5E9PV98 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim5E9PV98 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim5E9PV98 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim5E9PV98 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trim5E9PV98 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim5E9PV98 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.02■□□□□ 0.8
Trim5E9PV98 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.02■□□□□ 0.8
Trim5E9PV98 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim5E9PV98 Gm17971-201ENSMUST00000190239 806 ntBASIC20.02■□□□□ 0.8
Trim5E9PV98 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim5E9PV98 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trim5E9PV98 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Trim5E9PV98 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim5E9PV98 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim5E9PV98 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim5E9PV98 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim5E9PV98 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim5E9PV98 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim5E9PV98 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim5E9PV98 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim5E9PV98 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.01■□□□□ 0.79
Trim5E9PV98 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim5E9PV98 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim5E9PV98 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim5E9PV98 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim5E9PV98 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim5E9PV98 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim5E9PV98 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim5E9PV98 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Trim5E9PV98 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim5E9PV98 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim5E9PV98 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20■□□□□ 0.79
Trim5E9PV98 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim5E9PV98 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim5E9PV98 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim5E9PV98 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim5E9PV98 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim5E9PV98 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim5E9PV98 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim5E9PV98 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim5E9PV98 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim5E9PV98 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim5E9PV98 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms