Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4950D3YUM8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4950D3YUM8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm4950D3YUM8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4950D3YUM8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Gm4950D3YUM8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4950D3YUM8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4950D3YUM8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm4950D3YUM8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4950D3YUM8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4950D3YUM8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4950D3YUM8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.33■□□□□ 0.05
Gm4950D3YUM8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm4950D3YUM8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm4950D3YUM8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gm4950D3YUM8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4950D3YUM8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4950D3YUM8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Gm4950D3YUM8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4950D3YUM8 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.33■□□□□ 0.04
Gm4950D3YUM8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4950D3YUM8 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.33■□□□□ 0.04
Gm4950D3YUM8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Gm4950D3YUM8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Gm4950D3YUM8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4950D3YUM8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm4950D3YUM8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Gm10849-201ENSMUST00000100397 618 ntBASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Gm26571-201ENSMUST00000181399 666 ntBASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4950D3YUM8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Gm8495-201ENSMUST00000188740 694 ntBASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm4950D3YUM8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms