Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Gm12896-201ENSMUST00000118430 226 ntBASIC18.93■□□□□ 0.62
Rfx8D3YU81 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Gm38285-201ENSMUST00000192928 922 ntBASIC18.93■□□□□ 0.62
Rfx8D3YU81 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Zfp783-201ENSMUST00000095946 670 ntBASIC18.93■□□□□ 0.62
Rfx8D3YU81 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx8D3YU81 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.92■□□□□ 0.62
Rfx8D3YU81 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Rfx8D3YU81 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.92■□□□□ 0.62
Rfx8D3YU81 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rfx8D3YU81 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx8D3YU81 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx8D3YU81 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx8D3YU81 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.91■□□□□ 0.62
Rfx8D3YU81 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx8D3YU81 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx8D3YU81 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx8D3YU81 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx8D3YU81 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx8D3YU81 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rfx8D3YU81 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Tgds-204ENSMUST00000228543 1594 ntBASIC18.9■□□□□ 0.62
Rfx8D3YU81 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.9■□□□□ 0.62
Rfx8D3YU81 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx8D3YU81 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Rfx8D3YU81 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfx8D3YU81 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfx8D3YU81 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx8D3YU81 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rfx8D3YU81 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.89■□□□□ 0.61
Rfx8D3YU81 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx8D3YU81 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.89■□□□□ 0.61
Rfx8D3YU81 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx8D3YU81 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx8D3YU81 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx8D3YU81 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.89■□□□□ 0.61
Rfx8D3YU81 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rfx8D3YU81 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx8D3YU81 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx8D3YU81 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx8D3YU81 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rfx8D3YU81 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx8D3YU81 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx8D3YU81 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx8D3YU81 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx8D3YU81 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx8D3YU81 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx8D3YU81 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx8D3YU81 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx8D3YU81 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rfx8D3YU81 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx8D3YU81 Gm11927-201ENSMUST00000118472 759 ntBASIC18.88■□□□□ 0.61
Rfx8D3YU81 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx8D3YU81 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms