Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.96■□□□□ 0.95
Usp42B2RQC2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Usp42B2RQC2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp42B2RQC2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp42B2RQC2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.95■□□□□ 0.94
Usp42B2RQC2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.95■□□□□ 0.94
Usp42B2RQC2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.95■□□□□ 0.94
Usp42B2RQC2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp42B2RQC2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp42B2RQC2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Usp42B2RQC2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp42B2RQC2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp42B2RQC2 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.94■□□□□ 0.94
Usp42B2RQC2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.94■□□□□ 0.94
Usp42B2RQC2 Rarb-207ENSMUST00000225921 2756 ntBASIC20.93■□□□□ 0.94
Usp42B2RQC2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp42B2RQC2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp42B2RQC2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Usp42B2RQC2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp42B2RQC2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp42B2RQC2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp42B2RQC2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp42B2RQC2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp42B2RQC2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp42B2RQC2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp42B2RQC2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp42B2RQC2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Usp42B2RQC2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp42B2RQC2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp42B2RQC2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Usp42B2RQC2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.92■□□□□ 0.94
Usp42B2RQC2 Gm18025-201ENSMUST00000221733 862 ntBASIC20.92■□□□□ 0.94
Usp42B2RQC2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp42B2RQC2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp42B2RQC2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp42B2RQC2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Gm29791-202ENSMUST00000207888 369 ntBASIC20.91■□□□□ 0.94
Usp42B2RQC2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp42B2RQC2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Gm13168-201ENSMUST00000121771 632 ntBASIC20.9■□□□□ 0.94
Usp42B2RQC2 Gm10698-201ENSMUST00000182663 604 ntBASIC20.9■□□□□ 0.94
Usp42B2RQC2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.9■□□□□ 0.94
Usp42B2RQC2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Usp42B2RQC2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.89■□□□□ 0.94
Usp42B2RQC2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp42B2RQC2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp42B2RQC2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Usp42B2RQC2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Usp42B2RQC2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Gm42545-201ENSMUST00000202755 922 ntBASIC20.88■□□□□ 0.93
Usp42B2RQC2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Usp42B2RQC2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms