Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chd6A3KFM7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chd6A3KFM7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chd6A3KFM7 Gm11779-201ENSMUST00000118541 368 ntBASIC14.58□□□□□ -0.07
Chd6A3KFM7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.58□□□□□ -0.07
Chd6A3KFM7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.58□□□□□ -0.07
Chd6A3KFM7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Chd6A3KFM7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chd6A3KFM7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chd6A3KFM7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chd6A3KFM7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chd6A3KFM7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chd6A3KFM7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Chd6A3KFM7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chd6A3KFM7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chd6A3KFM7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chd6A3KFM7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chd6A3KFM7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chd6A3KFM7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Chd6A3KFM7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.57□□□□□ -0.08
Chd6A3KFM7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chd6A3KFM7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Gm15467-201ENSMUST00000120582 445 ntBASIC14.56□□□□□ -0.08
Chd6A3KFM7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd6A3KFM7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.55□□□□□ -0.08
Chd6A3KFM7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd6A3KFM7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chd6A3KFM7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.55□□□□□ -0.08
Chd6A3KFM7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chd6A3KFM7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd6A3KFM7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Chd6A3KFM7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd6A3KFM7 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.55□□□□□ -0.08
Chd6A3KFM7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chd6A3KFM7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd6A3KFM7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd6A3KFM7 Mir5131-201ENSMUST00000175426 93 ntBASIC14.54□□□□□ -0.08
Chd6A3KFM7 Psmb5-202ENSMUST00000227257 622 ntBASIC14.54□□□□□ -0.08
Chd6A3KFM7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd6A3KFM7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms