Protein–RNA interactions for Protein: A0A1B0GSM6

Gm13539, Predicted gene 13539, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm13539A0A1B0GSM6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Gm13539A0A1B0GSM6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Gm13539A0A1B0GSM6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm13539A0A1B0GSM6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm13539A0A1B0GSM6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm13539A0A1B0GSM6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm13539A0A1B0GSM6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm13539A0A1B0GSM6 Idnk-204ENSMUST00000226010 1898 ntBASIC16.54■□□□□ 0.24
Gm13539A0A1B0GSM6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Gm13539A0A1B0GSM6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm13539A0A1B0GSM6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Gm42569-201ENSMUST00000200539 472 ntBASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Gm13539A0A1B0GSM6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm13539A0A1B0GSM6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm13539A0A1B0GSM6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm13539A0A1B0GSM6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm13539A0A1B0GSM6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm13539A0A1B0GSM6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm13539A0A1B0GSM6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm13539A0A1B0GSM6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Gm13539A0A1B0GSM6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Gm13539A0A1B0GSM6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm13539A0A1B0GSM6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm13539A0A1B0GSM6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm13539A0A1B0GSM6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm13539A0A1B0GSM6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.52■□□□□ 0.23
Gm13539A0A1B0GSM6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm13539A0A1B0GSM6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm13539A0A1B0GSM6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Gm13539A0A1B0GSM6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm13539A0A1B0GSM6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm13539A0A1B0GSM6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm13539A0A1B0GSM6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.51■□□□□ 0.23
Gm13539A0A1B0GSM6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm13539A0A1B0GSM6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm13539A0A1B0GSM6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm13539A0A1B0GSM6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm13539A0A1B0GSM6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm13539A0A1B0GSM6 Gm38285-201ENSMUST00000192928 922 ntBASIC16.49■□□□□ 0.23
Gm13539A0A1B0GSM6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm13539A0A1B0GSM6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm13539A0A1B0GSM6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm13539A0A1B0GSM6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm13539A0A1B0GSM6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm13539A0A1B0GSM6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Gm13539A0A1B0GSM6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms