Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Gm6211-202ENSMUST00000167849 925 ntBASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trbv17A0A140T8P8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Trbv17A0A140T8P8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv17A0A140T8P8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv17A0A140T8P8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv17A0A140T8P8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Gm5408-201ENSMUST00000197998 747 ntBASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trbv17A0A140T8P8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv17A0A140T8P8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Gm12933-201ENSMUST00000120203 872 ntBASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms