Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc194A0A140LIT1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc194A0A140LIT1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc194A0A140LIT1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc194A0A140LIT1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc194A0A140LIT1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc194A0A140LIT1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc194A0A140LIT1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc194A0A140LIT1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.77■□□□□ 0.44
Ccdc194A0A140LIT1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc194A0A140LIT1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.77■□□□□ 0.44
Ccdc194A0A140LIT1 AV356131-201ENSMUST00000206201 750 ntBASIC17.77■□□□□ 0.44
Ccdc194A0A140LIT1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
Ccdc194A0A140LIT1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc194A0A140LIT1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc194A0A140LIT1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc194A0A140LIT1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc194A0A140LIT1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc194A0A140LIT1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc194A0A140LIT1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms