Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm9988-201ENSMUST00000069786 435 ntBASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Trav13d-4A0A0G2JFX3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm43060-201ENSMUST00000200621 289 ntBASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13d-4A0A0G2JFX3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms