Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-1A0A0G2JEU8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms