Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv16A0A0B4J1H3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv16A0A0B4J1H3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Trbv16A0A0B4J1H3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv16A0A0B4J1H3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv16A0A0B4J1H3 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.96□□□□□ -0.34
Trbv16A0A0B4J1H3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv16A0A0B4J1H3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trbv16A0A0B4J1H3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv16A0A0B4J1H3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv16A0A0B4J1H3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trbv16A0A0B4J1H3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv16A0A0B4J1H3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv16A0A0B4J1H3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.94□□□□□ -0.34
Trbv16A0A0B4J1H3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv16A0A0B4J1H3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv16A0A0B4J1H3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms