Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv3-4A0A0A6YXF1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ighv3-4A0A0A6YXF1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv3-4A0A0A6YXF1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv3-4A0A0A6YXF1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv3-4A0A0A6YXF1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv3-4A0A0A6YXF1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv3-4A0A0A6YXF1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.84□□□□□ -0.03
Ighv3-4A0A0A6YXF1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ighv3-4A0A0A6YXF1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv3-4A0A0A6YXF1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv3-4A0A0A6YXF1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm4974-201ENSMUST00000209974 875 ntBASIC14.83□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ighv3-4A0A0A6YXF1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm18101-201ENSMUST00000215769 548 ntBASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm6345-202ENSMUST00000180900 204 ntBASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm33142-201ENSMUST00000193913 867 ntBASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm22697-201ENSMUST00000175194 63 ntBASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ighv3-4A0A0A6YXF1 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms