Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Ighv1-52A0A0A6YXC3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Gm27275-201ENSMUST00000184318 272 ntBASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Gm37856-201ENSMUST00000191634 999 ntBASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Gm13158-201ENSMUST00000122007 736 ntBASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Gm20760-201ENSMUST00000179197 648 ntBASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.6□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Gm18666-201ENSMUST00000190039 958 ntBASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Gm10138-203ENSMUST00000206952 366 ntBASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ighv1-52A0A0A6YXC3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Ighv1-52A0A0A6YXC3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Mtag2-201ENSMUST00000058665 714 ntBASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-52A0A0A6YXC3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms