Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Dio3-201ENSMUST00000097228 1449 ntBASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbc1A0A0A6YWV4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm37856-201ENSMUST00000191634 999 ntBASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Flg-201ENSMUST00000050758 1488 ntBASIC16.42■□□□□ 0.22
Trbc1A0A0A6YWV4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Trmt13-210ENSMUST00000198454 880 ntBASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbc1A0A0A6YWV4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbc1A0A0A6YWV4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbc1A0A0A6YWV4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.39■□□□□ 0.21
Trbc1A0A0A6YWV4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbc1A0A0A6YWV4 Gm27275-201ENSMUST00000184318 272 ntBASIC16.39■□□□□ 0.21
Trbc1A0A0A6YWV4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbc1A0A0A6YWV4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbc1A0A0A6YWV4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbc1A0A0A6YWV4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbc1A0A0A6YWV4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.39■□□□□ 0.21
Trbc1A0A0A6YWV4 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.39■□□□□ 0.21
Trbc1A0A0A6YWV4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbc1A0A0A6YWV4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms