Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.67□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-11A0A0A6YWI9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.67□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Gm13146-201ENSMUST00000118508 780 ntBASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Gm10493-201ENSMUST00000097270 612 ntBASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ighv1-11A0A0A6YWI9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.62□□□□□ -0.39
Ighv1-11A0A0A6YWI9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms