Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.24□□□□□ -0.13
Trav17A0A075B655 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.24□□□□□ -0.13
Trav17A0A075B655 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav17A0A075B655 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav17A0A075B655 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav17A0A075B655 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.21□□□□□ -0.13
Trav17A0A075B655 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Gm21956-201ENSMUST00000179946 522 ntBASIC14.21□□□□□ -0.13
Trav17A0A075B655 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.21□□□□□ -0.13
Trav17A0A075B655 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav17A0A075B655 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav17A0A075B655 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav17A0A075B655 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav17A0A075B655 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav17A0A075B655 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav17A0A075B655 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav17A0A075B655 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Trav17A0A075B655 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav17A0A075B655 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trav17A0A075B655 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms