Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.84□□□□□ -0.19
Trav16A0A075B653 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav16A0A075B653 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav16A0A075B653 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav16A0A075B653 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Trav16A0A075B653 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav16A0A075B653 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav16A0A075B653 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Gm12251-201ENSMUST00000117893 792 ntBASIC13.82□□□□□ -0.2
Trav16A0A075B653 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.82□□□□□ -0.2
Trav16A0A075B653 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav16A0A075B653 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav16A0A075B653 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav16A0A075B653 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.8□□□□□ -0.2
Trav16A0A075B653 Smad6-203ENSMUST00000179458 273 ntBASIC13.8□□□□□ -0.2
Trav16A0A075B653 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav16A0A075B653 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.8□□□□□ -0.2
Trav16A0A075B653 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.8□□□□□ -0.2
Trav16A0A075B653 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Gm8969-201ENSMUST00000199694 526 ntBASIC13.8□□□□□ -0.2
Trav16A0A075B653 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.8□□□□□ -0.2
Trav16A0A075B653 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav16A0A075B653 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms