Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-1A0A075B644 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-1A0A075B644 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-1A0A075B644 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-1A0A075B644 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-1A0A075B644 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-1A0A075B644 Dio3-201ENSMUST00000097228 1449 ntBASIC12.71□□□□□ -0.38
Trav13-1A0A075B644 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-1A0A075B644 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-1A0A075B644 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav13-1A0A075B644 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Gm18666-201ENSMUST00000190039 958 ntBASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-1A0A075B644 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Flg-201ENSMUST00000050758 1488 ntBASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms