Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Dio3-201ENSMUST00000097228 1449 ntBASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Gm2399-201ENSMUST00000104944 225 ntBASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-1A0A075B606 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-1A0A075B606 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13d-1A0A075B606 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13d-1A0A075B606 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Gm18666-201ENSMUST00000190039 958 ntBASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-1A0A075B606 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms