Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Gm6139-201ENSMUST00000079261 882 ntBASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6-6A0A075B603 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6-6A0A075B603 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-6A0A075B603 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav6-6A0A075B603 Dancr-204ENSMUST00000132389 2347 ntBASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-6A0A075B603 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms