Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Trav1A0A075B5Z4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Rab3c-203ENSMUST00000224180 967 ntBASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav1A0A075B5Z4 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Mir5133-201ENSMUST00000174955 77 ntBASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Flg-201ENSMUST00000050758 1488 ntBASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav1A0A075B5Z4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav1A0A075B5Z4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav1A0A075B5Z4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Trav1A0A075B5Z4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav1A0A075B5Z4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav1A0A075B5Z4 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.58■□□□□ 0.25
Trav1A0A075B5Z4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav1A0A075B5Z4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav1A0A075B5Z4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav1A0A075B5Z4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Trav1A0A075B5Z4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav1A0A075B5Z4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav1A0A075B5Z4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms