Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Use1Q9CQ56 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.34□□□□□ -1.55
Use1Q9CQ56 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.34□□□□□ -1.55
Use1Q9CQ56 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Use1Q9CQ56 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Use1Q9CQ56 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
Use1Q9CQ56 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Use1Q9CQ56 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm14783-201ENSMUST00000118900 663 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm11447-201ENSMUST00000118983 858 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm9005-201ENSMUST00000119908 607 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm26170-201ENSMUST00000158419 148 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm24682-201ENSMUST00000158764 137 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm9006-201ENSMUST00000165520 841 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm18808-201ENSMUST00000173316 462 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm18558-201ENSMUST00000186253 1214 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm43148-201ENSMUST00000198237 520 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm18247-201ENSMUST00000222937 601 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm36262-201ENSMUST00000223274 499 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 AC174678.3-201ENSMUST00000227568 362 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.33□□□□□ -1.56
Use1Q9CQ56 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Use1Q9CQ56 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm15493-201ENSMUST00000119461 528 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm5405-201ENSMUST00000120478 609 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm15596-201ENSMUST00000121139 784 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm12494-201ENSMUST00000121684 521 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm11679-201ENSMUST00000121830 779 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm25227-201ENSMUST00000158204 112 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm3650-201ENSMUST00000180600 747 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm26970-201ENSMUST00000182990 964 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Mir7058-201ENSMUST00000184637 75 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm28586-201ENSMUST00000189857 456 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm37463-201ENSMUST00000193819 796 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm43033-201ENSMUST00000199682 425 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.32□□□□□ -1.56
Use1Q9CQ56 Gm31166-201ENSMUST00000209326 288 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms