Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm26346-201ENSMUST00000157525 329 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm25227-201ENSMUST00000158204 112 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm24155-201ENSMUST00000175259 110 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm29519-201ENSMUST00000186994 398 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm28586-201ENSMUST00000189857 456 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm18698-201ENSMUST00000192327 668 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm2979-201ENSMUST00000193442 463 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm37336-202ENSMUST00000193705 468 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm42886-201ENSMUST00000199214 466 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm18255-201ENSMUST00000211316 765 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm22351-201ENSMUST00000083925 107 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm23795-201ENSMUST00000084006 137 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.45□□□□□ -1.54
Lsm1Q8VC85 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm16423-201ENSMUST00000120078 947 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm22916-201ENSMUST00000157616 119 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm2602-201ENSMUST00000202112 571 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm44134-202ENSMUST00000204777 545 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.44□□□□□ -1.54
Lsm1Q8VC85 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Lsm1Q8VC85 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 145.3 ms