Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Nup54Q8BTS4 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.81□□□□□ -1.48
Nup54Q8BTS4 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nup54Q8BTS4 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
Nup54Q8BTS4 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Nup54Q8BTS4 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.81□□□□□ -1.48
Nup54Q8BTS4 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.81□□□□□ -1.48
Nup54Q8BTS4 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nup54Q8BTS4 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Nup54Q8BTS4 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm22592-201ENSMUST00000104242 131 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm11270-201ENSMUST00000117685 471 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm14335-201ENSMUST00000119165 810 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm15194-201ENSMUST00000120453 434 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm13024-201ENSMUST00000121756 718 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm27854-201ENSMUST00000175578 244 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm27030-201ENSMUST00000182551 464 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm18205-201ENSMUST00000209215 841 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Nup54Q8BTS4 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm13991-201ENSMUST00000120190 648 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm13593-201ENSMUST00000121329 692 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm23958-201ENSMUST00000157207 105 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm26169-201ENSMUST00000158420 135 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm25489-201ENSMUST00000158727 141 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm28186-201ENSMUST00000187447 679 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm42522-201ENSMUST00000196071 255 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm9685-201ENSMUST00000211275 538 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm19174-201ENSMUST00000216944 956 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.79□□□□□ -1.48
Nup54Q8BTS4 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup54Q8BTS4 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms