Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm11987-201ENSMUST00000118524 381 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm13473-201ENSMUST00000119289 367 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm14267-201ENSMUST00000119751 496 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm14301-201ENSMUST00000120181 324 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm12488-201ENSMUST00000122449 499 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm24380-201ENSMUST00000122696 324 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm25271-201ENSMUST00000157273 290 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm37838-201ENSMUST00000194464 312 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm37908-201ENSMUST00000195828 470 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm43743-202ENSMUST00000198353 491 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm4587-201ENSMUST00000209135 637 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm45690-201ENSMUST00000210775 246 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm23102-201ENSMUST00000083724 116 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm44897-201ENSMUST00000206187 1341 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm9440-201ENSMUST00000119667 539 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm13007-201ENSMUST00000121866 365 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm26086-201ENSMUST00000157902 263 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Mir3062-201ENSMUST00000174986 105 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm29596-201ENSMUST00000185710 385 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm28061-201ENSMUST00000189085 807 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm44184-201ENSMUST00000204290 132 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm6049-201ENSMUST00000222369 458 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 AV026068-231ENSMUST00000225862 482 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm15500-201ENSMUST00000071523 894 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Ddx55Q6ZPL9 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ddx55Q6ZPL9 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms