Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.69□□□□□ -1.5
ClpbQ60649 Gm27460-201ENSMUST00000184213 100 ntBASIC5.69□□□□□ -1.5
ClpbQ60649 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC5.69□□□□□ -1.5
ClpbQ60649 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 Gm45008-201ENSMUST00000206420 493 ntBASIC5.69□□□□□ -1.5
ClpbQ60649 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.69□□□□□ -1.5
ClpbQ60649 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.69□□□□□ -1.5
ClpbQ60649 Gm7802-201ENSMUST00000216464 262 ntBASIC5.69□□□□□ -1.5
ClpbQ60649 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.69□□□□□ -1.5
ClpbQ60649 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.69□□□□□ -1.5
ClpbQ60649 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 Gm5612-201ENSMUST00000053326 375 ntBASIC5.69□□□□□ -1.5
ClpbQ60649 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ClpbQ60649 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ClpbQ60649 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ClpbQ60649 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ClpbQ60649 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ClpbQ60649 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ClpbQ60649 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
ClpbQ60649 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ClpbQ60649 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
ClpbQ60649 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ClpbQ60649 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ClpbQ60649 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.68□□□□□ -1.5
ClpbQ60649 Gm20486-201ENSMUST00000101544 128 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Mir700-201ENSMUST00000102169 79 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Gm12308-201ENSMUST00000120440 389 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.68□□□□□ -1.5
ClpbQ60649 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Gm23450-201ENSMUST00000178285 91 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Gm29492-201ENSMUST00000187124 457 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.68□□□□□ -1.5
ClpbQ60649 Gm37774-201ENSMUST00000194401 245 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Gm35013-201ENSMUST00000197218 832 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Gm5886-202ENSMUST00000203957 522 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
ClpbQ60649 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.68□□□□□ -1.5
ClpbQ60649 Gm45850-201ENSMUST00000212536 338 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ClpbQ60649 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Gm18242-201ENSMUST00000218455 542 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.68□□□□□ -1.5
ClpbQ60649 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Gm18592-201ENSMUST00000221529 276 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
ClpbQ60649 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Gm24041-201ENSMUST00000083115 156 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ClpbQ60649 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ClpbQ60649 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ClpbQ60649 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
ClpbQ60649 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.68□□□□□ -1.5
ClpbQ60649 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ClpbQ60649 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.68□□□□□ -1.5
ClpbQ60649 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ClpbQ60649 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ClpbQ60649 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ClpbQ60649 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ClpbQ60649 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.67□□□□□ -1.5
ClpbQ60649 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.67□□□□□ -1.5
ClpbQ60649 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ClpbQ60649 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ClpbQ60649 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.67□□□□□ -1.5
ClpbQ60649 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ClpbQ60649 Gm6620-201ENSMUST00000120113 715 ntBASIC5.67□□□□□ -1.5
ClpbQ60649 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ClpbQ60649 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.67□□□□□ -1.5
ClpbQ60649 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.67□□□□□ -1.5
ClpbQ60649 Gm22599-201ENSMUST00000157597 132 ntBASIC5.67□□□□□ -1.5
ClpbQ60649 Gm22518-201ENSMUST00000158267 68 ntBASIC5.67□□□□□ -1.5
ClpbQ60649 Gm23050-201ENSMUST00000158775 165 ntBASIC5.67□□□□□ -1.5
ClpbQ60649 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.67□□□□□ -1.5
ClpbQ60649 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.67□□□□□ -1.5
ClpbQ60649 Gm26057-201ENSMUST00000178099 165 ntBASIC5.67□□□□□ -1.5
ClpbQ60649 Gm4845-201ENSMUST00000179202 562 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms