Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm22660-201ENSMUST00000104193 130 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm12344-201ENSMUST00000117087 329 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm11833-201ENSMUST00000118393 853 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm14793-201ENSMUST00000118739 311 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm15113-201ENSMUST00000119280 836 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm11198-201ENSMUST00000119771 974 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm15158-201ENSMUST00000120577 570 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm15381-201ENSMUST00000121501 1156 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Mir1983-201ENSMUST00000157523 132 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm24875-201ENSMUST00000158888 104 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm9457-201ENSMUST00000180176 372 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm27595-201ENSMUST00000184579 112 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm38305-201ENSMUST00000194825 223 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm43513-201ENSMUST00000199779 1076 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm7542-201ENSMUST00000201140 777 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm45739-201ENSMUST00000213094 388 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm46234-201ENSMUST00000218702 259 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm5176-202ENSMUST00000220267 583 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 AC122465.3-201ENSMUST00000221644 355 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 AC130673.1-201ENSMUST00000227992 435 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm5815-201ENSMUST00000050706 1185 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm23345-201ENSMUST00000083817 150 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm24522-201ENSMUST00000083964 108 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shisa3Q3UPR0 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm24462-201ENSMUST00000102430 106 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm3940-201ENSMUST00000105087 432 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm12607-201ENSMUST00000120724 493 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm14678-201ENSMUST00000121396 482 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm22024-201ENSMUST00000122733 287 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm15843-201ENSMUST00000146593 529 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Trbv10-201ENSMUST00000168322 289 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm22408-201ENSMUST00000174925 65 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm44370-201ENSMUST00000175436 112 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm18709-201ENSMUST00000180564 489 ntBASIC6.17□□□□□ -1.42
Shisa3Q3UPR0 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms