Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm4911-201ENSMUST00000119388 945 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm22613-201ENSMUST00000122679 292 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm8214-201ENSMUST00000172123 351 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm10784-201ENSMUST00000178715 238 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm37511-201ENSMUST00000192901 294 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm18692-201ENSMUST00000193047 511 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm43084-201ENSMUST00000200696 947 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Clec2j-202ENSMUST00000203658 606 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC8.89□□□□□ -0.99
Col17a1Q07563 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm23972-201ENSMUST00000083322 165 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Gm23795-201ENSMUST00000084006 137 ntBASIC8.89□□□□□ -0.99
Col17a1Q07563 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Col17a1Q07563 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Col17a1Q07563 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Col17a1Q07563 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col17a1Q07563 Gm8734-201ENSMUST00000211669 1312 ntBASIC8.88□□□□□ -0.99
Col17a1Q07563 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Col17a1Q07563 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col17a1Q07563 Gm44667-201ENSMUST00000207632 3337 ntBASIC8.88□□□□□ -0.99
Col17a1Q07563 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col17a1Q07563 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.88□□□□□ -0.99
Col17a1Q07563 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC8.88□□□□□ -0.99
Col17a1Q07563 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Col17a1Q07563 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col17a1Q07563 Gm23553-201ENSMUST00000157817 295 ntBASIC8.88□□□□□ -0.99
Col17a1Q07563 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Col17a1Q07563 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC8.88□□□□□ -0.99
Col17a1Q07563 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
Col17a1Q07563 Gm37836-201ENSMUST00000195875 175 ntBASIC8.88□□□□□ -0.99
Col17a1Q07563 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Col17a1Q07563 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Col17a1Q07563 Gm18541-201ENSMUST00000215935 538 ntBASIC8.88□□□□□ -0.99
Col17a1Q07563 AC153932.1-201ENSMUST00000218558 787 ntBASIC8.88□□□□□ -0.99
Col17a1Q07563 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC8.88□□□□□ -0.99
Col17a1Q07563 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col17a1Q07563 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Col17a1Q07563 Gm43197-201ENSMUST00000201493 2583 ntBASIC8.88□□□□□ -0.99
Col17a1Q07563 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col17a1Q07563 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC8.88□□□□□ -0.99
Col17a1Q07563 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC8.87□□□□□ -0.99
Col17a1Q07563 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col17a1Q07563 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col17a1Q07563 AC154576.1-202ENSMUST00000223966 3320 ntBASIC8.87□□□□□ -0.99
Col17a1Q07563 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col17a1Q07563 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.87□□□□□ -0.99
Col17a1Q07563 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Col17a1Q07563 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col17a1Q07563 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Col17a1Q07563 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col17a1Q07563 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC8.87□□□□□ -0.99
Col17a1Q07563 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Col17a1Q07563 Gm43386-201ENSMUST00000199654 4001 ntBASIC8.87□□□□□ -0.99
Col17a1Q07563 Gm1866-201ENSMUST00000120701 477 ntBASIC8.87□□□□□ -0.99
Col17a1Q07563 Gm6175-201ENSMUST00000121351 400 ntBASIC8.87□□□□□ -0.99
Col17a1Q07563 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC8.87□□□□□ -0.99
Col17a1Q07563 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC8.87□□□□□ -0.99
Col17a1Q07563 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col17a1Q07563 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Col17a1Q07563 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC8.87□□□□□ -0.99
Col17a1Q07563 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC8.87□□□□□ -0.99
Col17a1Q07563 Gm36966-201ENSMUST00000192217 413 ntBASIC8.87□□□□□ -0.99
Col17a1Q07563 AC166902.1-201ENSMUST00000216653 517 ntBASIC8.87□□□□□ -0.99
Col17a1Q07563 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col17a1Q07563 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Col17a1Q07563 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Col17a1Q07563 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col17a1Q07563 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col17a1Q07563 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.87□□□□□ -0.99
Col17a1Q07563 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC8.87□□□□□ -0.99
Col17a1Q07563 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col17a1Q07563 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col17a1Q07563 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Gm37107-201ENSMUST00000195326 2552 ntBASIC8.86□□□□□ -0.99
Col17a1Q07563 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col17a1Q07563 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Col17a1Q07563 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms