Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.18□□□□□ -1.42
NcanP55066 Snord66-201ENSMUST00000104051 75 ntBASIC6.18□□□□□ -1.42
NcanP55066 Gm6620-201ENSMUST00000120113 715 ntBASIC6.18□□□□□ -1.42
NcanP55066 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NcanP55066 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.18□□□□□ -1.42
NcanP55066 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Mir6410-201ENSMUST00000184204 104 ntBASIC6.18□□□□□ -1.42
NcanP55066 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.18□□□□□ -1.42
NcanP55066 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.18□□□□□ -1.42
NcanP55066 Gm7181-201ENSMUST00000202197 434 ntBASIC6.18□□□□□ -1.42
NcanP55066 Gm42646-201ENSMUST00000202233 914 ntBASIC6.18□□□□□ -1.42
NcanP55066 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.18□□□□□ -1.42
NcanP55066 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NcanP55066 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.18□□□□□ -1.42
NcanP55066 AC168881.1-201ENSMUST00000226018 430 ntBASIC6.18□□□□□ -1.42
NcanP55066 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NcanP55066 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NcanP55066 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.18□□□□□ -1.42
NcanP55066 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.18□□□□□ -1.42
NcanP55066 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
NcanP55066 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.18□□□□□ -1.42
NcanP55066 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.18□□□□□ -1.42
NcanP55066 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
NcanP55066 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.18□□□□□ -1.42
NcanP55066 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.17□□□□□ -1.42
NcanP55066 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.17□□□□□ -1.42
NcanP55066 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.17□□□□□ -1.42
NcanP55066 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
NcanP55066 Gm14679-201ENSMUST00000121536 722 ntBASIC6.17□□□□□ -1.42
NcanP55066 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.17□□□□□ -1.42
NcanP55066 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.17□□□□□ -1.42
NcanP55066 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.17□□□□□ -1.42
NcanP55066 Gm23945-201ENSMUST00000179609 92 ntBASIC6.17□□□□□ -1.42
NcanP55066 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.17□□□□□ -1.42
NcanP55066 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC6.17□□□□□ -1.42
NcanP55066 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.17□□□□□ -1.42
NcanP55066 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC6.17□□□□□ -1.42
NcanP55066 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NcanP55066 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.17□□□□□ -1.42
NcanP55066 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.17□□□□□ -1.42
NcanP55066 Gm42729-201ENSMUST00000201770 2930 ntBASIC6.17□□□□□ -1.42
NcanP55066 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NcanP55066 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NcanP55066 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.16□□□□□ -1.42
NcanP55066 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.16□□□□□ -1.42
NcanP55066 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NcanP55066 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.16□□□□□ -1.42
NcanP55066 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NcanP55066 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.16□□□□□ -1.42
NcanP55066 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
NcanP55066 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NcanP55066 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms