Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm28840-205ENSMUST00000189320 615 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Gm28835-203ENSMUST00000190062 615 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Gm18036-201ENSMUST00000195256 272 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Gm3148-201ENSMUST00000203594 612 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.4□□□□□ -1.39
Col2a1P28481 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.4□□□□□ -1.39
Col2a1P28481 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Clec2j-201ENSMUST00000032517 515 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col2a1P28481 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col2a1P28481 Gm25187-201ENSMUST00000083906 133 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col2a1P28481 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col2a1P28481 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col2a1P28481 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col2a1P28481 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col2a1P28481 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col2a1P28481 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col2a1P28481 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Col2a1P28481 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.39□□□□□ -1.39
Col2a1P28481 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col2a1P28481 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col2a1P28481 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Col2a1P28481 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col2a1P28481 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col2a1P28481 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col2a1P28481 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col2a1P28481 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col2a1P28481 Gm11369-201ENSMUST00000120812 318 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 Gm12685-201ENSMUST00000121702 214 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 Gm22916-201ENSMUST00000157616 119 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 Gm8358-201ENSMUST00000167222 555 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col2a1P28481 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.39□□□□□ -1.39
Col2a1P28481 Gm45660-201ENSMUST00000210267 151 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 Gm19256-201ENSMUST00000218550 231 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC6.39□□□□□ -1.39
Col2a1P28481 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC6.39□□□□□ -1.39
Col2a1P28481 Gm18940-201ENSMUST00000222518 871 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col2a1P28481 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col2a1P28481 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col2a1P28481 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col2a1P28481 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Col2a1P28481 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col2a1P28481 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col2a1P28481 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
Col2a1P28481 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.39□□□□□ -1.39
Col2a1P28481 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col2a1P28481 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col2a1P28481 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col2a1P28481 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC6.38□□□□□ -1.39
Col2a1P28481 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col2a1P28481 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col2a1P28481 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col2a1P28481 Mir546-201ENSMUST00000102105 121 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Col2a1P28481 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC6.38□□□□□ -1.39
Col2a1P28481 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.38□□□□□ -1.39
Col2a1P28481 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col2a1P28481 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col2a1P28481 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col2a1P28481 Gm8256-201ENSMUST00000169178 453 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col2a1P28481 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col2a1P28481 Gm22411-201ENSMUST00000175462 126 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 Gm22002-201ENSMUST00000175622 125 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 Gm10784-201ENSMUST00000178715 238 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Col2a1P28481 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col2a1P28481 Gm33952-201ENSMUST00000197795 408 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 Mir409-201ENSMUST00000198153 79 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col2a1P28481 Gm18325-201ENSMUST00000203228 835 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 Gm44673-201ENSMUST00000205692 996 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col2a1P28481 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col2a1P28481 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col2a1P28481 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.38□□□□□ -1.39
Col2a1P28481 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col2a1P28481 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col2a1P28481 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col2a1P28481 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col2a1P28481 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col2a1P28481 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col2a1P28481 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col2a1P28481 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col2a1P28481 Gm2199-201ENSMUST00000119065 874 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Gm25176-201ENSMUST00000122640 125 ntBASIC6.37□□□□□ -1.39
Col2a1P28481 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms