Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col4a1P02463 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col4a1P02463 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col4a1P02463 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col4a1P02463 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Col4a1P02463 Gm15186-201ENSMUST00000119345 563 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 Gm13333-201ENSMUST00000119424 781 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 Gm12317-201ENSMUST00000122307 319 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC6.77□□□□□ -1.33
Col4a1P02463 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col4a1P02463 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 Mir8097-201ENSMUST00000185150 119 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 Gm18728-201ENSMUST00000186155 753 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 Gm19029-201ENSMUST00000189923 564 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 Gm43018-201ENSMUST00000198075 1275 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 Trav3-2-201ENSMUST00000198999 305 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 AC123064.1-201ENSMUST00000218950 406 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.77□□□□□ -1.33
Col4a1P02463 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.77□□□□□ -1.33
Col4a1P02463 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.77□□□□□ -1.33
Col4a1P02463 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.77□□□□□ -1.33
Col4a1P02463 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col4a1P02463 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Col4a1P02463 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Col4a1P02463 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Col4a1P02463 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.76□□□□□ -1.33
Col4a1P02463 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a1P02463 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a1P02463 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a1P02463 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col4a1P02463 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.76□□□□□ -1.33
Col4a1P02463 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Col4a1P02463 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col4a1P02463 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a1P02463 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.76□□□□□ -1.33
Col4a1P02463 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.76□□□□□ -1.33
Col4a1P02463 Gm11679-201ENSMUST00000121830 779 ntBASIC6.76□□□□□ -1.33
Col4a1P02463 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a1P02463 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a1P02463 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col4a1P02463 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col4a1P02463 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC6.76□□□□□ -1.33
Col4a1P02463 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a1P02463 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col4a1P02463 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col4a1P02463 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Col4a1P02463 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a1P02463 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col4a1P02463 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col4a1P02463 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col4a1P02463 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Col4a1P02463 Gm16007-201ENSMUST00000117837 286 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Gm11366-201ENSMUST00000119279 429 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.75□□□□□ -1.33
Col4a1P02463 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.75□□□□□ -1.33
Col4a1P02463 Gm28097-201ENSMUST00000187333 366 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Gm28567-201ENSMUST00000190270 693 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Gm37044-201ENSMUST00000193531 693 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Gm38369-201ENSMUST00000195101 693 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Gm43408-201ENSMUST00000198263 440 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Gm44776-201ENSMUST00000207212 381 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.75□□□□□ -1.33
Col4a1P02463 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 AC165953.1-201ENSMUST00000226386 357 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col4a1P02463 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Col4a1P02463 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col4a1P02463 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col4a1P02463 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.75□□□□□ -1.33
Col4a1P02463 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.75□□□□□ -1.33
Col4a1P02463 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col4a1P02463 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Col4a1P02463 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.75□□□□□ -1.33
Col4a1P02463 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col4a1P02463 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.74□□□□□ -1.33
Col4a1P02463 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Col4a1P02463 Gm16128-201ENSMUST00000117855 626 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 Gm17121-201ENSMUST00000170414 847 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 Olfr331-202ENSMUST00000170501 957 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 Gm17222-201ENSMUST00000180135 847 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col4a1P02463 Mir409-201ENSMUST00000198153 79 ntBASIC6.74□□□□□ -1.33
Col4a1P02463 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms