Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Col6a3E9PWQ3 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 AC139941.2-201ENSMUST00000221565 1824 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm26595-201ENSMUST00000181585 484 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm8703-201ENSMUST00000203793 730 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm19880-201ENSMUST00000207731 318 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm7040-201ENSMUST00000223271 443 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm38187-201ENSMUST00000195609 4709 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm43395-201ENSMUST00000198717 2240 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.39□□□□□ -1.55
Col6a3E9PWQ3 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm12994-201ENSMUST00000119601 447 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm23905-201ENSMUST00000157568 109 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Trbv11-201ENSMUST00000194354 260 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm44234-201ENSMUST00000204246 900 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm13932-201ENSMUST00000120873 610 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm29592-201ENSMUST00000189434 370 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm18181-201ENSMUST00000190670 736 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm27773-201ENSMUST00000184087 78 ntBASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a3E9PWQ3 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Gm12486-201ENSMUST00000120887 541 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Gm27249-201ENSMUST00000185049 328 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms