Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm42522-201ENSMUST00000196071 255 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 Gm43712-201ENSMUST00000198020 291 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 Gm44432-201ENSMUST00000203342 938 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 Gm44604-201ENSMUST00000205475 496 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Scrt1Q99M85 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 Gm18247-201ENSMUST00000222937 601 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Scrt1Q99M85 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Scrt1Q99M85 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Scrt1Q99M85 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Scrt1Q99M85 Gm10258-201ENSMUST00000091270 2123 ntBASIC5.09□□□□□ -1.59
Scrt1Q99M85 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.09□□□□□ -1.59
Scrt1Q99M85 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Scrt1Q99M85 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.09□□□□□ -1.6
Scrt1Q99M85 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Scrt1Q99M85 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Scrt1Q99M85 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.09□□□□□ -1.6
Scrt1Q99M85 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.09□□□□□ -1.6
Scrt1Q99M85 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
Scrt1Q99M85 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Scrt1Q99M85 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.09□□□□□ -1.6
Scrt1Q99M85 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Scrt1Q99M85 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Scrt1Q99M85 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Scrt1Q99M85 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm15074-201ENSMUST00000117603 936 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm13311-201ENSMUST00000117863 379 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm13738-201ENSMUST00000122437 469 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm15335-201ENSMUST00000122442 411 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm22492-201ENSMUST00000157192 297 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm24359-201ENSMUST00000158418 221 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm15970-201ENSMUST00000160623 834 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm29284-201ENSMUST00000188363 255 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm37581-201ENSMUST00000192371 988 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm37758-201ENSMUST00000194275 629 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm6009-201ENSMUST00000210848 280 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm6562-201ENSMUST00000221903 464 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm43113-201ENSMUST00000199713 1754 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm38697-201ENSMUST00000198061 1746 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.08□□□□□ -1.6
Scrt1Q99M85 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Scrt1Q99M85 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Scrt1Q99M85 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.07□□□□□ -1.6
Scrt1Q99M85 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.07□□□□□ -1.6
Scrt1Q99M85 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Gm12287-201ENSMUST00000119770 707 ntBASIC5.07□□□□□ -1.6
Scrt1Q99M85 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Scrt1Q99M85 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms