Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm10356-201ENSMUST00000097152 1258 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm37403-201ENSMUST00000193775 3521 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm38062-201ENSMUST00000192541 1856 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 CT025642.2-201ENSMUST00000225009 1649 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm36927-201ENSMUST00000192504 1841 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm13728-201ENSMUST00000117471 400 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm8475-201ENSMUST00000118211 526 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm13835-201ENSMUST00000118459 685 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm8855-201ENSMUST00000118888 878 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm14607-201ENSMUST00000119119 491 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm14106-201ENSMUST00000119382 438 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm14238-201ENSMUST00000120227 323 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm13578-201ENSMUST00000120849 590 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm12358-201ENSMUST00000121842 520 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Defa-ps12-201ENSMUST00000122353 193 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm3810-201ENSMUST00000122413 476 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm25722-201ENSMUST00000157498 279 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm26169-201ENSMUST00000158420 135 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm25717-201ENSMUST00000158631 353 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm22530-201ENSMUST00000158820 118 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm8358-201ENSMUST00000167222 555 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm29413-201ENSMUST00000186019 880 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm29639-201ENSMUST00000188375 580 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm29545-201ENSMUST00000188878 694 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 AC156560.1-201ENSMUST00000221425 256 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 AC122393.1-201ENSMUST00000226570 319 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 AC117202.1-201ENSMUST00000227007 445 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 AC154806.3-201ENSMUST00000227376 439 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Gm10205-201ENSMUST00000087431 234 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 CT030159.1-201ENSMUST00000221580 2261 ntBASIC7.23□□□□□ -1.25
Clp1Q99LI9 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Clp1Q99LI9 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC7.22□□□□□ -1.25
Clp1Q99LI9 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms