Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Usp47Q8BY87 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm14472-201ENSMUST00000119815 282 ntBASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm25824-201ENSMUST00000157092 121 ntBASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm24295-201ENSMUST00000158298 131 ntBASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm29474-201ENSMUST00000187688 379 ntBASIC7.92□□□□□ -1.14
Usp47Q8BY87 Igkv15-101-201ENSMUST00000195917 299 ntBASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm9332-201ENSMUST00000198431 730 ntBASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC7.92□□□□□ -1.14
Usp47Q8BY87 AC161609.1-201ENSMUST00000225878 474 ntBASIC7.92□□□□□ -1.14
Usp47Q8BY87 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Usp47Q8BY87 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm7676-201ENSMUST00000084055 319 ntBASIC7.92□□□□□ -1.14
Usp47Q8BY87 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Usp47Q8BY87 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC7.92□□□□□ -1.14
Usp47Q8BY87 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.92□□□□□ -1.14
Usp47Q8BY87 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Usp47Q8BY87 Gm38036-201ENSMUST00000194586 3564 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm37079-201ENSMUST00000194114 2135 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm45179-201ENSMUST00000208452 4337 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm7919-201ENSMUST00000202043 1389 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm15490-201ENSMUST00000119894 387 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm13537-201ENSMUST00000120467 267 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm26489-201ENSMUST00000157880 264 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm2367-201ENSMUST00000192374 472 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm43444-201ENSMUST00000198123 291 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm33601-201ENSMUST00000210001 961 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC7.91□□□□□ -1.14
Usp47Q8BY87 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp47Q8BY87 CT025579.3-201ENSMUST00000224543 451 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp47Q8BY87 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm37429-201ENSMUST00000193807 1799 ntBASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp47Q8BY87 Gm42781-201ENSMUST00000201317 2719 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp47Q8BY87 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Gm8595-201ENSMUST00000118250 630 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 Gm12074-201ENSMUST00000120189 219 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 Gm15152-201ENSMUST00000121540 394 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Mir1963-201ENSMUST00000158594 59 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Gm22420-201ENSMUST00000178795 126 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 Gm28017-201ENSMUST00000183434 126 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 Igkv4-56-201ENSMUST00000198436 349 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 Gm35648-201ENSMUST00000202304 475 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 Gm45690-201ENSMUST00000210775 246 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 AC161383.1-201ENSMUST00000227356 527 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 CT025686.1-201ENSMUST00000227592 438 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 AC123665.6-201ENSMUST00000228568 538 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp47Q8BY87 Gm11290-204ENSMUST00000224688 3042 ntBASIC7.9□□□□□ -1.14
Usp47Q8BY87 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Usp47Q8BY87 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
Usp47Q8BY87 Abcc2-202ENSMUST00000099413 1926 ntBASIC7.9□□□□□ -1.15
Usp47Q8BY87 Gm38387-201ENSMUST00000191945 2577 ntBASIC7.9□□□□□ -1.15
Usp47Q8BY87 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Usp47Q8BY87 Gm43891-201ENSMUST00000205132 3112 ntBASIC7.9□□□□□ -1.15
Usp47Q8BY87 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Usp47Q8BY87 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Usp47Q8BY87 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp47Q8BY87 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp47Q8BY87 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms